STRINGSTRING
ENSCING00000008215 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000008215" - Zinc finger protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000008215Zinc finger protein (627 aa)    
Predicted Functional Partners:
ENSCING00000007312
Uncharacterized protein (856 aa)
     
      0.675
ENSCING00000020815
Uncharacterized protein (347 aa)
     
 
  0.618
ENSCING00000007605
Uncharacterized protein (381 aa)
     
 
  0.618
ENSCING00000011366
IkappaB kinase; Uncharacterized protein (172 aa)
       
  0.596
ENSCING00000017560
Uncharacterized protein (122 aa)
       
      0.583
ENSCING00000009655
DNA polymerase (2157 aa)
     
   
  0.572
EIF6
Uncharacterized protein ; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis (245 aa)
   
   
  0.572
ENSCING00000006015
Uncharacterized protein (461 aa)
     
 
  0.541
r27a
R27a protein (155 aa)
     
 
  0.540
creb/atf-c
Transcription factor Ci-CREB/ATF-c (298 aa)
           
  0.522
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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