STRINGSTRING
Cin.21125 protein (Ciona intestinalis) - STRING interaction network
"Cin.21125" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.21125Uncharacterized protein (343 aa)    
Predicted Functional Partners:
ENSCING00000020287
Guanine nucleotide-binding protein subunit gamma ; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein- effector interaction (67 aa)
       
  0.727
ENSCING00000023776
Uncharacterized protein (383 aa)
   
 
 
0.693
ENSCING00000003768
Uncharacterized protein (347 aa)
       
  0.690
ENSCING00000017275
Uncharacterized protein (271 aa)
       
      0.656
ENSCING00000024996
Guanine nucleotide-binding protein subunit gamma ; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein- effector interaction (75 aa)
       
    0.652
gabbr1
Uncharacterized protein (769 aa)
     
  0.631
ENSCING00000002077
Uncharacterized protein (339 aa)
     
  0.631
ENSCING00000018111
Uncharacterized protein (173 aa)
       
  0.476
ENSCING00000020167
Uncharacterized protein (199 aa)
       
  0.476
ENSCING00000020698
Uncharacterized protein (229 aa)
       
  0.476
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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