STRINGSTRING
ENSCING00000008385 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000008385" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000008385Uncharacterized protein (288 aa)    
Predicted Functional Partners:
ENSCING00000021754
Uncharacterized protein (87 aa)
     
  0.830
ENSCING00000018304
Uncharacterized protein (228 aa)
 
   
  0.781
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
     
      0.781
ENSCING00000023678
Uncharacterized protein (203 aa)
     
  0.770
ENSCING00000007478
Uncharacterized protein (823 aa)
     
  0.682
ENSCING00000003953
Uncharacterized protein (605 aa)
       
      0.678
ENSCING00000001048
Uncharacterized protein (464 aa)
     
  0.674
ENSCING00000021186
Uncharacterized protein (105 aa)
     
 
  0.654
ENSCING00000012576
Uncharacterized protein (666 aa)
     
 
    0.621
nek8
Uncharacterized protein (274 aa)
   
 
0.621
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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