STRINGSTRING
Cin.49047 protein (Ciona intestinalis) - STRING interaction network
"Cin.49047" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.49047Uncharacterized protein (494 aa)    
Predicted Functional Partners:
ENSCING00000008242
Uncharacterized protein (815 aa)
     
    0.919
ENSCING00000022892
Uncharacterized protein (404 aa)
     
  0.914
fuse
Far upstream element-binding protein (318 aa)
       
 
  0.833
ENSCING00000014326
Uncharacterized protein (437 aa)
     
    0.806
ENSCING00000003319
Zinc finger protein (349 aa)
       
    0.772
sf3b1
Uncharacterized protein (898 aa)
     
  0.759
ENSCING00000023523
Uncharacterized protein (482 aa)
     
  0.759
ENSCING00000006401
Uncharacterized protein (724 aa)
     
 
  0.694
ENSCING00000006015
Uncharacterized protein (461 aa)
     
  0.693
sf3b3
Uncharacterized protein (1216 aa)
     
  0.672
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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