STRINGSTRING
ENSCING00000008473 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000008473" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000008473Uncharacterized protein ; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (322 aa)    
Predicted Functional Partners:
ENSCING00000004789
Uncharacterized protein (814 aa)
     
 
  0.938
ENSCING00000013374
Uncharacterized protein (177 aa)
     
 
  0.925
ENSCING00000014447
Uncharacterized protein (372 aa)
     
 
  0.896
gtpbp4
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (639 aa)
     
 
  0.893
ENSCING00000001858
Uncharacterized protein (225 aa)
     
      0.877
ENSCING00000022509
Uncharacterized protein (162 aa)
     
 
  0.873
ENSCING00000014189
Uncharacterized protein (288 aa)
     
 
  0.866
sdad1
Uncharacterized protein (680 aa)
     
        0.859
ENSCING00000007225
Uncharacterized protein (209 aa)
     
      0.857
ENSCING00000023385
Uncharacterized protein (378 aa)
   
 
  0.841
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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