STRINGSTRING
Cin.16883 protein (Ciona intestinalis) - STRING interaction network
"Cin.16883" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.16883Uncharacterized protein (171 aa)    
Predicted Functional Partners:
s-themis-b
Self-incompatibility-linked polycystic kidney disease protein-1B precursor (2500 aa)
       
  0.522
ENSCING00000019259
Uncharacterized protein (1685 aa)
       
  0.522
ENSCING00000020908
Uncharacterized protein (282 aa)
       
  0.522
ENSCING00000011981
Uncharacterized protein (542 aa)
       
  0.522
ENSCING00000011385
Uncharacterized protein (165 aa)
       
  0.522
ENSCING00000004263
Uncharacterized protein (807 aa)
       
  0.522
ENSCING00000008479
Uncharacterized protein (400 aa)
       
  0.491
ENSCING00000024003
Uncharacterized protein (192 aa)
 
            0.448
Cin.36436
Uncharacterized protein (188 aa)
           
  0.442
ENSCING00000012335
Uncharacterized protein (203 aa)
           
  0.442
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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