STRINGSTRING
ENSCING00000008538 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000008538" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000008538Uncharacterized protein (608 aa)    
Predicted Functional Partners:
pde10a
Uncharacterized protein (784 aa)
     
  0.921
ENSCING00000021553
Uncharacterized protein (221 aa)
       
  0.921
ENSCING00000022281
Uncharacterized protein (179 aa)
       
  0.921
ENSCING00000002214
Uncharacterized protein (518 aa)
   
0.919
ENSCING00000004328
Uncharacterized protein LOC100177987 (257 aa)
       
  0.912
ENSCING00000003329
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1141 aa)
     
 
  0.910
polr2b
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1183 aa)
     
 
  0.907
ENSCING00000013757
Uncharacterized protein LOC100176380 (388 aa)
       
  0.906
ENSCING00000005607
Nucleoside diphosphate kinase (163 aa)
       
  0.906
ENSCING00000022904
Uncharacterized protein (135 aa)
     
 
  0.906
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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