STRINGSTRING
siat4 protein (Ciona intestinalis) - STRING interaction network
"siat4" - Alpha-2,3-sialyltransferase ST3Gal I in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
siat4Alpha-2,3-sialyltransferase ST3Gal I (379 aa)    
Predicted Functional Partners:
ENSCING00000013219
Uncharacterized protein (444 aa)
         
  0.909
ENSCING00000020522
Uncharacterized protein (137 aa)
       
  0.906
ENSCING00000007275
Uncharacterized protein (1499 aa)
         
  0.604
fras1
Uncharacterized protein (3955 aa)
     
 
  0.437
ENSCING00000019181
Uncharacterized protein (609 aa)
         
  0.417
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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