STRINGSTRING
ift52 protein (Ciona intestinalis) - STRING interaction network
"ift52" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ift52Uncharacterized protein (426 aa)    
Predicted Functional Partners:
ENSCING00000018239
Uncharacterized protein (336 aa)
     
  0.948
ENSCING00000004071
Uncharacterized protein (652 aa)
     
  0.924
ift140
Uncharacterized protein (1490 aa)
     
 
  0.897
ift80
Uncharacterized protein (760 aa)
     
  0.894
ENSCING00000002712
Uncharacterized protein (830 aa)
     
  0.862
ENSCING00000002612
Uncharacterized protein (404 aa)
     
  0.861
kif3a
Uncharacterized protein (650 aa)
     
 
  0.853
ENSCING00000024059
Uncharacterized protein (507 aa)
     
  0.852
kif3b
Kinesin family member 3B (744 aa)
         
  0.849
Cin.3813
Uncharacterized protein (152 aa)
       
  0.827
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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