STRINGSTRING
ENSCING00000008588 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000008588" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000008588Uncharacterized protein (434 aa)    
Predicted Functional Partners:
six12
Transcription factor protein (238 aa)
     
 
  0.877
ENSCING00000019659
Uncharacterized protein (414 aa)
       
 
  0.866
six45
Transcription factor protein (555 aa)
     
 
  0.756
six36
Uncharacterized protein (403 aa)
     
 
  0.754
pax6
Homeobox transcription factor Pax6 (497 aa)
       
 
  0.688
pax3/7
Uncharacterized protein (673 aa)
       
 
  0.564
bmp2/4
Transforming growth factor beta superfamily signaling ligand precursor (376 aa)
       
 
  0.549
ENSCING00000010029
Histone H2A (141 aa)
     
    0.526
egfr1
Epidermal growth factor receptor precursor (1462 aa)
     
 
  0.523
egfr2
Uncharacterized protein (880 aa)
     
 
  0.523
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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