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tbx2/3 protein (Ciona intestinalis) - STRING interaction network
"tbx2/3" - T-box containing transcription factor in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbx2/3T-box containing transcription factor (803 aa)    
Predicted Functional Partners:
ENSCING00000009221
Uncharacterized protein (572 aa)
       
    0.754
bmp2/4
Transforming growth factor beta superfamily signaling ligand precursor (376 aa)
       
 
  0.707
pax3/7
Uncharacterized protein (673 aa)
     
 
  0.644
cbp
Uncharacterized protein (1533 aa)
     
  0.592
hh2
Hedgehog homolog 2 precursor (312 aa)
       
 
  0.586
hh1
Hedgehog homolog 1 ; Intercellular signal essential for a variety of patterning events during development (557 aa)
       
 
  0.586
pax6
Homeobox transcription factor Pax6 (497 aa)
     
 
  0.552
fkh
Transcription factor protein (633 aa)
     
 
  0.532
lhx2/9
Uncharacterized protein (171 aa)
       
 
  0.525
evx-a
Transcription factor protein (464 aa)
       
 
  0.521
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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