STRINGSTRING
stip protein (Ciona intestinalis) - STRING interaction network
"stip" - Sip1/TFIP11 interacting protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stipSip1/TFIP11 interacting protein (832 aa)    
Predicted Functional Partners:
prpf19
Uncharacterized protein (437 aa)
     
  0.981
ENSCING00000001601
Uncharacterized protein (144 aa)
       
  0.965
cdc40
Uncharacterized protein (504 aa)
     
  0.941
ENSCING00000002654
Uncharacterized protein (697 aa)
     
  0.915
ENSCING00000008817
Uncharacterized protein (956 aa)
     
  0.888
ENSCING00000006565
Uncharacterized protein (545 aa)
     
  0.886
ENSCING00000003597
Uncharacterized protein (1131 aa)
     
  0.886
ENSCING00000016347
Uncharacterized protein (721 aa)
     
  0.884
dhx35
Uncharacterized protein (661 aa)
     
  0.884
ENSCING00000002709
Uncharacterized protein (686 aa)
     
  0.883
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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