STRINGSTRING
flot2 protein (Ciona intestinalis) - STRING interaction network
"flot2" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flot2Uncharacterized protein (422 aa)    
Predicted Functional Partners:
ENSCING00000001422
Caveolin ; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity (236 aa)
       
 
  0.841
ENSCING00000020337
Caveolin ; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity (142 aa)
       
 
  0.739
ENSCING00000001428
Caveolin ; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity (211 aa)
       
 
  0.739
ENSCING00000001842
Uncharacterized protein (640 aa)
       
      0.647
ENSCING00000020877
Uncharacterized protein (324 aa)
       
      0.586
ENSCING00000011722
Uncharacterized protein (426 aa)
   
0.460
rab2
GTP-binding protein rab-2 homologue (198 aa)
       
      0.406
ENSCING00000024996
Guanine nucleotide-binding protein subunit gamma ; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein- effector interaction (75 aa)
       
      0.406
ENSCING00000004195
Uncharacterized protein (333 aa)
       
      0.406
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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