STRINGSTRING
ift80 protein (Ciona intestinalis) - STRING interaction network
"ift80" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ift80Uncharacterized protein (760 aa)    
Predicted Functional Partners:
ENSCING00000002612
Uncharacterized protein (404 aa)
     
  0.916
ift140
Uncharacterized protein (1490 aa)
     
  0.911
ift52
Uncharacterized protein (426 aa)
     
  0.894
ENSCING00000002712
Uncharacterized protein (830 aa)
     
  0.879
ENSCING00000004990
Uncharacterized protein (1384 aa)
     
  0.835
ENSCING00000004270
Uncharacterized protein (679 aa)
     
  0.823
ENSCING00000018239
Uncharacterized protein (336 aa)
     
  0.822
wdr35
Uncharacterized protein (408 aa)
     
  0.812
Cin.3813
Uncharacterized protein (152 aa)
     
  0.793
ENSCING00000008887
Uncharacterized protein (588 aa)
     
  0.776
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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