STRINGSTRING
ENSCING00000008885 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000008885" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000008885Uncharacterized protein (538 aa)    
Predicted Functional Partners:
ENSCING00000013288
Uncharacterized protein (435 aa)
     
    0.935
ENSCING00000009008
Uncharacterized protein (387 aa)
     
      0.878
Cin.25686
Uncharacterized protein (373 aa)
       
  0.869
ENSCING00000007020
Uncharacterized protein (273 aa)
     
    0.863
ENSCING00000002360
Histone deacetylase (430 aa)
     
  0.862
Cin.52569
Histone deacetylase (404 aa)
     
  0.861
ENSCING00000013164
Uncharacterized protein (215 aa)
         
    0.800
ENSCING00000015298
Uncharacterized protein (362 aa)
     
  0.774
ENSCING00000009221
Uncharacterized protein (572 aa)
     
  0.715
ENSCING00000009117
Uncharacterized protein (1237 aa)
     
  0.691
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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