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vglut protein (Ciona intestinalis) - STRING interaction network
"vglut" - Vesicular glutamate transporter in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vglutVesicular glutamate transporter (663 aa)    
Predicted Functional Partners:
vgat
Vesicular GABA transporter (637 aa)
     
   
  0.607
syt1
Synaptotagmin (328 aa)
     
 
  0.552
ENSCING00000006714
Uncharacterized protein (118 aa)
         
  0.546
ENSCING00000015685
Synaptosomal-associated protein (160 aa)
     
 
  0.533
ENSCING00000021593
Uncharacterized protein (220 aa)
     
 
  0.528
ENSCING00000020046
Uncharacterized protein (139 aa)
     
 
  0.516
ENSCING00000002173
Uncharacterized protein (1518 aa)
     
 
  0.513
ENSCING00000021774
Uncharacterized protein (76 aa)
     
 
  0.505
ENSCING00000005538
Uncharacterized protein (236 aa)
     
 
  0.505
ENSCING00000002400
Uncharacterized protein (588 aa)
     
 
  0.503
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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