STRINGSTRING
cbfb protein (Ciona intestinalis) - STRING interaction network
"cbfb" - Core-binding factor, b subunit in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbfbCore-binding factor, b subunit (181 aa)    
Predicted Functional Partners:
ENSCING00000002253
Uncharacterized protein (432 aa)
       
  0.940
ENSCING00000005739
Transcription factor protein (761 aa)
       
 
  0.670
ENSCING00000018089
Uncharacterized protein (76 aa)
       
      0.561
ENSCING00000007582
Uncharacterized protein (465 aa)
       
 
  0.455
ENSCING00000002021
Uncharacterized protein (1147 aa)
           
  0.436
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (9%) [HD]