STRINGSTRING
ENSCING00000025101 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000025101" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000025101Uncharacterized protein (374 aa)    
Predicted Functional Partners:
smarcc2
Uncharacterized protein (639 aa)
     
  0.968
ENSCING00000009008
Uncharacterized protein (387 aa)
     
  0.965
actl6b
Uncharacterized protein (423 aa)
     
  0.943
ENSCING00000007774
Uncharacterized protein (405 aa)
     
  0.908
ENSCING00000013288
Uncharacterized protein (435 aa)
     
  0.901
ENSCING00000014057
Uncharacterized protein (629 aa)
     
  0.896
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
     
  0.888
ENSCING00000003432
Uncharacterized protein (1219 aa)
     
  0.856
ENSCING00000003570
Uncharacterized protein (250 aa)
     
  0.804
Cin.52569
Histone deacetylase (404 aa)
     
  0.792
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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