STRINGSTRING
ci-glyr protein (Ciona intestinalis) - STRING interaction network
"ci-glyr" - Glycine receptor precursor in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ci-glyrGlycine receptor precursor (491 aa)    
Predicted Functional Partners:
ENSCING00000021049
Uncharacterized protein (385 aa)
     
0.641
ENSCING00000004249
Uncharacterized protein (446 aa)
     
0.589
vgat
Vesicular GABA transporter (637 aa)
     
   
  0.584
ENSCING00000010660
Uncharacterized protein (411 aa)
       
      0.508
ENSCING00000005496
Uncharacterized protein (412 aa)
       
      0.508
ENSCING00000002468
Uncharacterized protein (413 aa)
       
      0.508
ENSCING00000004445
Uncharacterized protein (473 aa)
           
  0.446
ENSCING00000004106
Uncharacterized protein (492 aa)
     
   
  0.442
csd
Cysteine sulfinic acid decarboxylase (488 aa)
     
   
  0.442
gad
Glutamate decarboxylase 1 (531 aa)
     
   
  0.442
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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