STRINGSTRING
betaTrCP protein (Ciona intestinalis) - STRING interaction network
"betaTrCP" - Beta-transducin repeat-containing homologue protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
betaTrCPBeta-transducin repeat-containing homologue protein (621 aa)    
Predicted Functional Partners:
ENSCING00000001685
Uncharacterized protein (162 aa)
       
  0.977
gsk
Glycogen synthase kinase alpha/beta (407 aa)
       
  0.973
ENSCING00000006501
Uncharacterized protein (778 aa)
     
  0.965
ENSCING00000008124
Uncharacterized protein (453 aa)
     
  0.956
ENSCING00000007020
Uncharacterized protein (273 aa)
     
  0.941
ENSCING00000010722
Uncharacterized protein (336 aa)
   
0.936
ck-1a1
Uncharacterized protein (340 aa)
     
  0.925
ENSCING00000007992
Uncharacterized protein (317 aa)
     
  0.925
ENSCING00000002874
Uncharacterized protein (435 aa)
     
  0.925
ENSCING00000012333
Uncharacterized protein (241 aa)
         
  0.900
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (9%) [HD]