STRINGSTRING
ENSCING00000009296 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000009296" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000009296Uncharacterized protein (592 aa)    
Predicted Functional Partners:
ENSCING00000000162
Uncharacterized protein (196 aa)
   
 
  0.667
ENSCING00000021473
Uncharacterized protein (448 aa)
       
  0.639
ENSCING00000006997
Uncharacterized protein (477 aa)
       
  0.639
ENSCING00000007405
Uncharacterized protein (238 aa)
   
 
  0.625
ENSCING00000015951
Uncharacterized protein (260 aa)
   
 
  0.600
ENSCING00000004605
Acireductone dioxygenase (Fe(2+)-requiring) ; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene) (181 aa)
   
   
  0.537
ENSCING00000016626
Uncharacterized protein (259 aa)
       
    0.515
ENSCING00000005557
Uncharacterized protein (375 aa)
       
    0.515
ENSCING00000014168
Uncharacterized protein (260 aa)
       
    0.515
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
         
  0.510
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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