STRINGSTRING
LOC778715 protein (Ciona intestinalis) - STRING interaction network
"LOC778715" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC778715Transcription factor protein (1039 aa)    
Predicted Functional Partners:
ENSCING00000023054
Uncharacterized protein (181 aa)
       
  0.915
ENSCING00000020664
Uncharacterized protein; Zinc finger protein (251 aa)
       
  0.915
zf(c2h2)-8
Zinc finger protein (300 aa)
       
  0.915
ENSCING00000020966
Uncharacterized protein (227 aa)
       
  0.915
ENSCING00000022017
Zinc finger protein (302 aa)
       
  0.915
ENSCING00000024784
Zinc finger protein (375 aa)
       
  0.915
ENSCING00000023644
Uncharacterized protein (137 aa)
       
  0.915
ENSCING00000023665
Uncharacterized protein (521 aa)
       
  0.915
ENSCING00000021875
Uncharacterized protein (328 aa)
       
  0.915
ENSCING00000023719
Zinc finger protein ZF(C2H2)-82 (236 aa)
       
  0.915
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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