STRINGSTRING
ENSCING00000009383 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000009383" - Xylose isomerase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000009383Xylose isomerase (415 aa)    
Predicted Functional Partners:
ENSCING00000006997
Uncharacterized protein (477 aa)
   
 
  0.962
ENSCING00000002259
Uncharacterized protein (360 aa)
     
 
  0.909
ENSCING00000011372
Uncharacterized protein (349 aa)
       
    0.901
ENSCING00000024163
Uncharacterized protein (319 aa)
         
  0.900
ENSCING00000006724
Uncharacterized protein (482 aa)
         
    0.900
ENSCING00000004329
Uncharacterized protein (311 aa)
         
    0.900
ENSCING00000018750
Uncharacterized protein (978 aa)
       
  0.830
ENSCING00000003495
Uncharacterized protein (1111 aa)
         
    0.800
ENSCING00000021473
Uncharacterized protein (448 aa)
   
 
  0.639
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
           
  0.548
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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