STRINGSTRING
galc protein (Ciona intestinalis) - STRING interaction network
"galc" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galcUncharacterized protein (677 aa)    
Predicted Functional Partners:
ENSCING00000002461
Uncharacterized protein (392 aa)
         
  0.908
ENSCING00000019577
Uncharacterized protein (303 aa)
     
 
    0.904
ENSCING00000019121
Uncharacterized protein (518 aa)
         
  0.903
ENSCING00000007924
Uncharacterized protein (561 aa)
         
  0.903
LOC494378
Uncharacterized protein ; Converts sphingomyelin to ceramide (599 aa)
         
  0.903
ENSCING00000008365
Uncharacterized protein (401 aa)
         
  0.901
ENSCING00000014148
Uncharacterized protein (425 aa)
         
    0.900
ENSCING00000012036
Uncharacterized protein (424 aa)
         
    0.900
ENSCING00000006470
Uncharacterized protein (383 aa)
         
    0.900
lag1-like1
Transcription factor protein (382 aa)
         
    0.900
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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