STRINGSTRING
tln2 protein (Ciona intestinalis) - STRING interaction network
"tln2" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tln2Uncharacterized protein (2536 aa)    
Predicted Functional Partners:
ENSCING00000023532
Uncharacterized protein (1062 aa)
     
  0.992
ctnna2
Uncharacterized protein (899 aa)
     
  0.971
ENSCING00000006913
Uncharacterized protein (647 aa)
     
  0.971
ENSCING00000009362
Integrin beta (827 aa)
     
  0.969
ENSCING00000006316
Integrin beta (828 aa)
     
  0.969
ENSCING00000002989
Integrin beta (710 aa)
     
  0.969
ENSCING00000009558
Uncharacterized protein (482 aa)
     
  0.943
ENSCING00000014887
Integrin beta (811 aa)
     
  0.942
ENSCING00000003141
Integrin beta (751 aa)
     
  0.906
ENSCING00000006518
Uncharacterized protein (165 aa)
     
  0.865
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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