STRINGSTRING
aco1 protein (Ciona intestinalis) - STRING interaction network
"aco1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aco1Uncharacterized protein ; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (892 aa)    
Predicted Functional Partners:
ENSCING00000008658
Isocitrate dehydrogenase [NADP] (422 aa)
   
  0.981
ENSCING00000018343
Isocitrate dehydrogenase [NADP] (414 aa)
   
  0.981
ENSCING00000007491
Uncharacterized protein (398 aa)
   
  0.971
ENSCING00000007286
Uncharacterized protein (370 aa)
   
  0.971
ENSCING00000004407
Uncharacterized protein (353 aa)
   
  0.971
acl
ATP citrate-lyase (404 aa)
   
  0.947
ENSCING00000024567
Uncharacterized protein (105 aa)
   
 
  0.937
ENSCING00000018403
Citrate synthase (469 aa)
   
  0.871
ENSCING00000009433
Uncharacterized protein (781 aa)
   
 
  0.726
ENSCING00000021189
Uncharacterized protein (264 aa)
   
 
  0.726
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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