STRINGSTRING
ift140 protein (Ciona intestinalis) - STRING interaction network
"ift140" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ift140Uncharacterized protein (1490 aa)    
Predicted Functional Partners:
ENSCING00000007399
Uncharacterized protein (1197 aa)
     
  0.937
ENSCING00000004990
Uncharacterized protein (1384 aa)
     
  0.927
ift80
Uncharacterized protein (760 aa)
     
  0.911
ift52
Uncharacterized protein (426 aa)
     
 
  0.897
wdr35
Uncharacterized protein (408 aa)
     
  0.896
ENSCING00000002712
Uncharacterized protein (830 aa)
     
 
  0.879
ENSCING00000024059
Uncharacterized protein (507 aa)
     
  0.858
ENSCING00000018239
Uncharacterized protein (336 aa)
     
 
  0.851
ENSCING00000002612
Uncharacterized protein (404 aa)
     
 
  0.851
ENSCING00000005972
Uncharacterized protein (132 aa)
     
  0.847
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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