STRINGSTRING
ENSCING00000009588 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000009588" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000009588Uncharacterized protein (144 aa)    
Predicted Functional Partners:
ENSCING00000006320
Uncharacterized protein (512 aa)
   
 
  0.905
ENSCING00000006006
Uncharacterized protein (567 aa)
   
 
  0.905
ENSCING00000003654
Uncharacterized protein (415 aa)
   
     
  0.786
ENSCING00000005536
Uncharacterized protein (264 aa)
   
     
  0.753
ENSCING00000006223
Uncharacterized protein (289 aa)
   
     
  0.739
ENSCING00000021034
Uncharacterized protein (221 aa)
   
     
  0.716
gpd2
Uncharacterized protein (683 aa)
   
   
  0.699
dnajc10
Uncharacterized protein (817 aa)
     
 
  0.595
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
       
 
  0.556
ENSCING00000003622
Uridine kinase (505 aa)
           
  0.513
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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