STRINGSTRING
zf(phd)-2 protein (Ciona intestinalis) - STRING interaction network
"zf(phd)-2" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zf(phd)-2Uncharacterized protein (818 aa)    
Predicted Functional Partners:
swi/snf
SWI/SNF protein (1003 aa)
     
  0.984
ENSCING00000005480
Uncharacterized protein (589 aa)
     
  0.983
rbbp4
Uncharacterized protein (431 aa)
     
  0.978
ash2-like
Ash2-like protein (352 aa)
     
  0.968
ENSCING00000014428
Uncharacterized protein (519 aa)
     
  0.964
ENSCING00000006248
Uncharacterized protein (454 aa)
     
      0.961
hmg2-like
Transcription factor protein (510 aa)
       
    0.947
ENSCING00000002320
Uncharacterized protein (307 aa)
       
  0.942
ENSCING00000009100
Uncharacterized protein (317 aa)
     
  0.931
ENSCING00000022359
Histone H3 (136 aa)
       
 
  0.912
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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