STRINGSTRING
erk5 protein (Ciona intestinalis) - STRING interaction network
"erk5" - Mitogen-activated protein kinase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
erk5Mitogen-activated protein kinase (820 aa)    
Predicted Functional Partners:
mapkk1/2
Mitogen-activated protein kinase kinase (377 aa)
     
0.972
ENSCING00000008202
Uncharacterized protein (361 aa)
     
0.944
ENSCING00000012576
Uncharacterized protein (666 aa)
     
  0.943
ENSCING00000007986
Dual specificity phosphatase (434 aa)
     
  0.921
mapkk5
Uncharacterized protein (458 aa)
     
0.921
ENSCING00000020330
Uncharacterized protein (227 aa)
     
  0.908
ENSCING00000013452
Uncharacterized protein (296 aa)
     
  0.908
ENSCING00000007532
Uncharacterized protein (218 aa)
     
  0.908
ENSCING00000003809
Uncharacterized protein (373 aa)
     
  0.908
dusp8.16
Dual specificity phosphatase (750 aa)
     
  0.908
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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