STRINGSTRING
ENSCING00000009956 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000009956" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000009956Uncharacterized protein (127 aa)    
Predicted Functional Partners:
ENSCING00000006084
Uncharacterized protein (725 aa)
   
 
  0.837
ENSCING00000002987
Uncharacterized protein (731 aa)
   
 
  0.837
dpyd
Uncharacterized protein (1024 aa)
   
 
  0.740
ENSCING00000008368
Uncharacterized protein ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is generated from t [...] (410 aa)
   
   
  0.739
gsr
Uncharacterized protein (472 aa)
   
  0.673
ENSCING00000005921
Uncharacterized protein (999 aa)
         
  0.644
ENSCING00000014331
Uncharacterized protein (267 aa)
     
 
  0.643
dnajc10
Uncharacterized protein (817 aa)
   
 
  0.622
ENSCING00000002850
Uncharacterized protein (2241 aa)
         
  0.606
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
   
  0.591
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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