STRINGSTRING
ENSCING00000010001 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000010001" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000010001Uncharacterized protein (505 aa)    
Predicted Functional Partners:
ENSCING00000019384
Uncharacterized protein (472 aa)
     
  0.831
zf(parp)-3
Uncharacterized protein; Zinc finger protein (565 aa)
     
  0.831
ENSCING00000005644
Uncharacterized protein (537 aa)
     
  0.831
ENSCING00000019210
Uncharacterized protein (215 aa)
     
  0.780
ENSCING00000024480
Uncharacterized protein (116 aa)
     
  0.780
ENSCING00000021458
Uncharacterized protein (659 aa)
     
  0.780
ENSCING00000019620
Uncharacterized protein (147 aa)
     
  0.780
parp4
Uncharacterized protein (513 aa)
     
  0.780
ENSCING00000024161
Uncharacterized protein (92 aa)
 
            0.627
rl32
Rl32 protein (136 aa)
 
            0.586
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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