STRINGSTRING
Cin.35503 protein (Ciona intestinalis) - STRING interaction network
"Cin.35503" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.35503Uncharacterized protein (137 aa)    
Predicted Functional Partners:
ENSCING00000001546
Uncharacterized protein (1185 aa)
     
  0.810
ENSCING00000009221
Uncharacterized protein (572 aa)
   
  0.745
Cin.29734
Uncharacterized protein (192 aa)
     
  0.694
ENSCING00000023482
Uncharacterized protein (607 aa)
     
  0.649
r27a
R27a protein (155 aa)
     
  0.622
ENSCING00000019630
Uncharacterized protein (176 aa)
     
  0.558
impdh2
Inosine-5’-monophosphate dehydrogenase (384 aa)
   
   
  0.556
ago2
Uncharacterized protein (862 aa)
     
  0.556
wdhd1
WD repeat and HMG-box DNA binding protein 1 (965 aa)
     
 
  0.547
ENSCING00000008396
Uncharacterized protein (197 aa)
       
  0.544
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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