STRINGSTRING
socs7 protein (Ciona intestinalis) - STRING interaction network
"socs7" - Suppressor of cytokine signaling in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
socs7Suppressor of cytokine signaling (509 aa)    
Predicted Functional Partners:
ENSCING00000002160
Uncharacterized protein (114 aa)
       
  0.950
jak
Janus kinase (1138 aa)
       
  0.937
socs6
Suppressor of cytokine signaling (406 aa)
     
 
 
0.800
src
Uncharacterized protein (471 aa)
     
  0.682
stat-b
STAT-b protein (805 aa)
       
  0.669
stat-a
Uncharacterized protein (661 aa)
       
  0.657
gp130-like
Class I cytokine receptor glycoprotein 130-like precursor (1123 aa)
       
  0.593
ENSCING00000005770
Uncharacterized protein (472 aa)
     
  0.576
ENSCING00000003438
Uncharacterized protein (454 aa)
     
  0.576
ENSCING00000022729
Uncharacterized protein (508 aa)
     
  0.576
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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