STRINGSTRING
Cin.21609 protein (Ciona intestinalis) - STRING interaction network
"Cin.21609" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.21609Uncharacterized protein (346 aa)    
Predicted Functional Partners:
ENSCING00000012421
Uncharacterized protein (441 aa)
   
 
  0.901
ENSCING00000004146
Uncharacterized protein (412 aa)
 
   
  0.837
ENSCING00000000311
Uncharacterized protein (415 aa)
   
 
  0.717
th
Tyrosine 3-monooxygenase (429 aa)
 
   
  0.612
ENSCING00000003462
Tryptophan hydroxylase (448 aa)
 
   
  0.610
ENSCING00000006533
Uncharacterized protein (305 aa)
 
   
  0.605
ENSCING00000006586
Uncharacterized protein (345 aa)
       
      0.605
ENSCING00000002850
Uncharacterized protein (2241 aa)
     
   
  0.559
ENSCING00000020809
Uncharacterized protein (227 aa)
   
   
  0.491
ENSCING00000012146
Uncharacterized protein (315 aa)
   
   
  0.491
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (8%) [HD]