STRINGSTRING
ENSCING00000010478 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000010478" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000010478Uncharacterized protein (242 aa)    
Predicted Functional Partners:
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
   
  0.802
ENSCING00000003016
Uncharacterized protein (737 aa)
       
      0.671
ENSCING00000002850
Uncharacterized protein (2241 aa)
   
   
  0.659
ENSCING00000006950
Uncharacterized protein (351 aa)
   
  0.608
ENSCING00000003622
Uridine kinase (505 aa)
   
 
  0.583
ENSCING00000006084
Uncharacterized protein (725 aa)
   
   
  0.548
ENSCING00000002987
Uncharacterized protein (731 aa)
   
   
  0.548
ENSCING00000015162
Uncharacterized protein (249 aa)
   
 
  0.526
ENSCING00000021663
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (139 aa)
   
  0.524
ENSCING00000009118
Uncharacterized protein (443 aa)
   
   
  0.519
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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