STRINGSTRING
centd2 protein (Ciona intestinalis) - STRING interaction network
"centd2" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
centd2Uncharacterized protein; Zinc finger protein (1330 aa)    
Predicted Functional Partners:
rhou
Wrch protein (259 aa)
       
  0.655
rcl1
Rac and Cdc42-like 1 protein (194 aa)
       
  0.653
LOC445702
Rac1 protein (192 aa)
       
  0.653
LOC445704
TC10 protein (193 aa)
       
  0.628
ENSCING00000000475
Uncharacterized protein (623 aa)
       
  0.605
rhoa
RhoA protein (193 aa)
       
  0.603
rac2
Rac2 protein (192 aa)
       
  0.589
ENSCING00000009241
Uncharacterized protein ; Mitochondrial GTPase involved in mitochondrial trafficking (619 aa)
         
    0.572
ENSCING00000007307
Uncharacterized protein (590 aa)
     
  0.570
copa
Uncharacterized protein ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network (1225 aa)
     
    0.511
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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