STRINGSTRING
ENSCING00000011490 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000011490" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000011490Uncharacterized protein ; Phosphodiesterase responsible for the U6 snRNA 3’ end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA (262 aa)    
Predicted Functional Partners:
ENSCING00000000988
Uncharacterized protein (243 aa)
       
      0.561
ENSCING00000012518
Uncharacterized protein (805 aa)
       
      0.561
ENSCING00000006985
Uncharacterized protein (852 aa)
       
      0.561
dhx35
Uncharacterized protein (661 aa)
       
      0.561
ENSCING00000004178
Uncharacterized protein (767 aa)
       
      0.561
ENSCING00000003306
Uncharacterized protein (330 aa)
       
      0.561
ENSCING00000003116
Peptidyl-prolyl cis-trans isomerase ; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (245 aa)
       
      0.561
ENSCING00000003017
Uncharacterized protein (240 aa)
       
      0.561
ENSCING00000002709
Uncharacterized protein (686 aa)
       
      0.561
ENSCING00000001601
Uncharacterized protein (144 aa)
       
      0.561
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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