STRINGSTRING
ENSCING00000011544 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000011544" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000011544Uncharacterized protein (624 aa)    
Predicted Functional Partners:
gmps
Uncharacterized protein (688 aa)
       
  0.525
ENSCING00000004210
Uncharacterized protein (209 aa)
     
 
  0.459
ENSCING00000023410
Uncharacterized protein (1269 aa)
         
  0.445
ENSCING00000019124
Uncharacterized protein ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position (344 aa)
   
        0.422
ENSCING00000018262
Uncharacterized protein (84 aa)
   
   
  0.417
ENSCING00000024641
Uncharacterized protein (150 aa)
   
   
  0.417
ENSCING00000019934
Uncharacterized protein (169 aa)
   
   
  0.417
ENSCING00000020864
Uncharacterized protein (249 aa)
   
   
  0.417
ENSCING00000023002
Uncharacterized protein (233 aa)
   
   
  0.417
ENSCING00000023178
Uncharacterized protein (179 aa)
   
   
  0.417
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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