STRINGSTRING
ENSCING00000007417 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000007417" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000007417Uncharacterized protein (445 aa)    
Predicted Functional Partners:
ENSCING00000001739
Uncharacterized protein ; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1635 aa)
     
 
    0.711
ENSCING00000003393
Uncharacterized protein (351 aa)
       
      0.679
ENSCING00000018138
Uncharacterized protein (235 aa)
 
            0.668
ENSCING00000007520
Uncharacterized protein (909 aa)
     
 
  0.643
ENSCING00000008017
Uncharacterized protein (888 aa)
     
 
    0.623
ap1b1
Uncharacterized protein (772 aa)
     
    0.613
ap1m1
Uncharacterized protein (422 aa)
         
    0.607
ciarr
Arrestin (253 aa)
     
 
  0.604
ENSCING00000020806
Uncharacterized protein (183 aa)
       
  0.601
ENSCING00000021790
Uncharacterized protein (182 aa)
       
  0.601
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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