STRINGSTRING
atf4/5 protein (Ciona intestinalis) - STRING interaction network
"atf4/5" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atf4/5Transcription factor protein (340 aa)    
Predicted Functional Partners:
tef/hlf
Transcription factor protein (393 aa)
       
 
  0.647
LOC494391
Uncharacterized protein (1026 aa)
         
  0.556
fos
Transcription factor protein (501 aa)
       
  0.528
atf2/7
Transcription factor protein (631 aa)
       
  0.528
atf3
Transcription factor protein (273 aa)
       
  0.528
xbpa
Transcription factor protein (309 aa)
     
   
  0.471
creb/atf-d
Uncharacterized protein (408 aa)
           
  0.456
creb/atf-a
Transcription factor protein (649 aa)
       
 
  0.447
eif2ak4
Uncharacterized protein (1156 aa)
           
  0.443
ENSCING00000013923
Uncharacterized protein (190 aa)
           
  0.443
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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