STRINGSTRING
ENSCING00000011842 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000011842" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000011842Uncharacterized protein (278 aa)    
Predicted Functional Partners:
ENSCING00000000288
Uncharacterized protein (804 aa)
     
 
  0.832
ENSCING00000012515
Uncharacterized protein (315 aa)
     
 
  0.733
ENSCING00000022035
Uncharacterized protein (309 aa)
     
 
  0.707
ENSCING00000007985
Uncharacterized protein (704 aa)
     
 
  0.707
ENSCING00000016470
Uncharacterized protein (607 aa)
     
 
  0.532
ENSCING00000006088
Uncharacterized protein (688 aa)
     
 
  0.532
cipc2
Similar to putative prohormone convertase 2 (660 aa)
     
 
  0.532
pcsk5
Uncharacterized protein (608 aa)
     
 
  0.532
ENSCING00000004662
Uncharacterized protein ; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway (183 aa)
     
 
  0.524
ENSCING00000006411
Uncharacterized protein (610 aa)
     
 
  0.496
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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