STRINGSTRING
ENSCING00000011949 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000011949" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000011949Uncharacterized protein (770 aa)    
Predicted Functional Partners:
ENSCING00000023254
Uncharacterized protein (412 aa)
     
      0.876
vps8
Uncharacterized protein (1238 aa)
     
      0.752
ENSCING00000001526
Uncharacterized protein (863 aa)
       
      0.733
ENSCING00000003974
Uncharacterized protein (351 aa)
       
      0.686
vps16
Uncharacterized protein (844 aa)
       
      0.686
ENSCING00000006468
Uncharacterized protein (871 aa)
     
      0.674
ENSCING00000025123
Uncharacterized protein (116 aa)
       
      0.674
VPS41
Zinc finger protein (841 aa)
       
      0.542
ENSCING00000006831
Uncharacterized protein (391 aa)
           
  0.502
ENSCING00000025047
Uncharacterized protein (180 aa)
     
   
  0.481
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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