STRINGSTRING
ENSCING00000012017 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000012017" - Zinc finger protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000012017Zinc finger protein (TRAF/RING)-4 (330 aa)    
Predicted Functional Partners:
ENSCING00000002344
Uncharacterized protein (198 aa)
       
  0.864
ENSCING00000008707
Uncharacterized protein (347 aa)
       
      0.805
ENSCING00000008035
Zinc finger protein Ci-ZF(ZZ/RING)-1 (778 aa)
       
  0.655
zf(zz)-7
Uncharacterized protein; Zinc finger protein (619 aa)
       
  0.655
ENSCING00000023687
Uncharacterized protein (820 aa)
     
  0.650
zf(cxxc)-1
Zinc finger protein (818 aa)
         
  0.633
ENSCING00000001770
Zinc finger protein (694 aa)
         
  0.623
ENSCING00000000272
Uncharacterized protein (2337 aa)
     
 
  0.617
herc4
Uncharacterized protein (1029 aa)
         
  0.616
ENSCING00000022915
Uncharacterized protein (156 aa)
     
  0.582
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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