STRINGSTRING
gli protein (Ciona intestinalis) - STRING interaction network
"gli" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gliTranscription factor protein (1098 aa)    
Predicted Functional Partners:
ENSCING00000008083
Uncharacterized protein (473 aa)
       
  0.973
LOC778715
Transcription factor protein (1039 aa)
       
  0.915
ENSCING00000004284
Uncharacterized protein (369 aa)
       
  0.883
smoothened
Smoothened protein (441 aa)
     
  0.867
betaTrCP
Beta-transducin repeat-containing homologue protein (621 aa)
     
  0.854
hh1
Hedgehog homolog 1 ; Intercellular signal essential for a variety of patterning events during development (557 aa)
     
  0.847
ENSCING00000004226
Ubiquitin carboxyl-terminal hydrolase (1099 aa)
     
      0.832
hh2
Hedgehog homolog 2 precursor (312 aa)
     
  0.818
ENSCING00000008022
Uncharacterized protein (1310 aa)
       
  0.796
ENSCING00000018399
Uncharacterized protein (1179 aa)
     
  0.788
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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