STRINGSTRING
ctbp1 protein (Ciona intestinalis) - STRING interaction network
"ctbp1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctbp1Uncharacterized protein (442 aa)    
Predicted Functional Partners:
tcf/lef
Transcription factor protein (351 aa)
       
  0.947
Cin.52569
Histone deacetylase (404 aa)
     
  0.941
ENSCING00000007814
Phosphoserine aminotransferase (386 aa)
   
  0.916
su(h)
Suppressor of hairless homolog ; Transcriptional regulator that plays a central role in Notch signaling, a signaling pathway involved in cell-cell communication that regulates a broad spectrum of cell-fate determinations. Acts as a transcriptional repressor when it is not associated with Notch proteins. When associated with some Notch protein, it acts as a transcriptional activator that activates transcription of Notch target genes (By similarity). Required for the transcriptional expression of Brachyury, suggesting that it participates in notochord differentiation (554 aa)
     
  0.874
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
 
  0.847
groucho2
Groucho (835 aa)
     
  0.841
groucho1
Groucho (847 aa)
     
  0.841
ENSCING00000005983
Uncharacterized protein ; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (673 aa)
       
 
  0.806
ENSCING00000012827
Uncharacterized protein (287 aa)
   
   
  0.788
ENSCING00000013163
Uncharacterized protein (62 aa)
       
    0.747
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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