STRINGSTRING
tnpo1 protein (Ciona intestinalis) - STRING interaction network
"tnpo1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnpo1Uncharacterized protein (756 aa)    
Predicted Functional Partners:
ENSCING00000005042
Uncharacterized protein (922 aa)
     
 
  0.930
Cin.19146
Uncharacterized protein ; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (161 aa)
     
 
  0.923
ENSCING00000004712
Uncharacterized protein (390 aa)
       
 
  0.920
ENSCING00000008639
Uncharacterized protein (1021 aa)
     
 
  0.918
ENSCING00000001150
Uncharacterized protein (602 aa)
     
      0.874
ENSCING00000014720
Uncharacterized protein (610 aa)
     
 
  0.841
ENSCING00000001999
Uncharacterized protein (473 aa)
       
      0.805
ipo5
Uncharacterized protein (1110 aa)
     
 
0.795
ipo9
Uncharacterized protein (1011 aa)
     
 
  0.754
ENSCING00000020912
Uncharacterized protein (85 aa)
       
 
  0.754
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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