STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100175511Growth arrest and DNA damage-inducible proteins-interacting protein 1-like. (219 aa)    
Predicted Functional Partners:
LOC100176514
peptidyl-tRNA hydrolase ICT1, mitochondrial.
   
 
 0.913
LOC100187432
39S ribosomal protein L11, mitochondrial-like; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.908
H2XKM0_CIOIN
Uncharacterized protein.
   
   0.895
F6R725_CIOIN
Uncharacterized protein.
   
   0.892
LOC100175065
Uncharacterized protein LOC100175065.
   
 
 0.877
LOC100179051
39S ribosomal protein L49, mitochondrial-like.
   
 
 0.868
H2XPC5_CIOIN
Ribosomal_L16 domain-containing protein.
   
 0.862
LOC100179663
39S ribosomal protein L24, mitochondrial.
   
   0.860
H2XU39_CIOIN
Uncharacterized protein.
    
 
 0.854
H2XYK0_CIOIN
L51_S25_CI-B8 domain-containing protein.
   
   0.853
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (28%) [HD]