STRINGSTRING
b4gal-t7 protein (Ciona intestinalis) - STRING interaction network
"b4gal-t7" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
b4gal-t7Uncharacterized protein (259 aa)    
Predicted Functional Partners:
b3galt6
Beta-1,3-galactosyltransferase 6 (327 aa)
     
 
  0.958
xt
Xylosyltransferase ; Catalyzes the first step in biosynthesis of glycosaminoglycan. Transfers D-xylose from UDP-D-xylose to specific serine residues of the core protein. Initial enzyme in the biosynthesis of chondroitin sulfate and dermatan sulfate proteoglycans in fibroblasts and chondrocytes (848 aa)
     
 
  0.956
ENSCING00000001850
Uncharacterized protein ; Cell surface proteoglycan that bears heparan sulfate (521 aa)
         
  0.639
ENSCING00000011506
Uncharacterized protein (182 aa)
 
            0.635
ENSCING00000018512
Syndecan ; Cell surface proteoglycan (210 aa)
         
  0.604
uglcat1
Beta-1,3-glucuronosyltransferase (340 aa)
     
   
  0.602
ENSCING00000020793
Uncharacterized protein (180 aa)
           
  0.569
ENSCING00000004503
Uncharacterized protein (584 aa)
           
  0.564
ENSCING00000003202
Uncharacterized protein ; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite (388 aa)
     
   
  0.562
ENSCING00000002640
Uncharacterized protein ; Cell surface proteoglycan that bears heparan sulfate (438 aa)
         
  0.562
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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