STRINGSTRING
lta4h protein (Ciona intestinalis) - STRING interaction network
"lta4h" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lta4hUncharacterized protein (610 aa)    
Predicted Functional Partners:
ENSCING00000007740
Uncharacterized protein (675 aa)
         
  0.908
ENSCING00000005447
Uncharacterized protein (182 aa)
 
 
 
  0.686
ENSCING00000004229
Uncharacterized protein (526 aa)
   
 
  0.676
ENSCING00000018234
Uncharacterized protein (381 aa)
   
 
  0.671
ENSCING00000007699
Uncharacterized protein (983 aa)
   
 
  0.619
ENSCING00000009118
Uncharacterized protein (443 aa)
     
 
  0.600
ENSCING00000000433
Uncharacterized protein (453 aa)
       
 
  0.597
ENSCING00000023790
Uncharacterized protein (1081 aa)
   
 
  0.563
ENSCING00000007366
Uncharacterized protein (219 aa)
     
 
  0.549
ENSCING00000020027
Uncharacterized protein (324 aa)
           
  0.487
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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